STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15748.1MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 2.7e-17 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00. (452 aa)    
Predicted Functional Partners:
KXA15746.1
Protein RfaE, domain I; KEGG: fnu:FN1786 3.1e-102 ADP-heptose synthase; Psort location: Cytoplasmic, score: 9.97.
       0.776
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.776
KXA15749.1
Putative butyryl-CoA:acetate CoA-transferase; KEGG: ckl:CKL_3018 4.3e-137 cat2; hypothetical protein; Psort location: Cytoplasmic, score: 9.97.
  
    0.775
KXA16195.1
KEGG: rlt:Rleg2_4805 2.6e-32 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.642
rpmA
Ribosomal protein L27; KEGG: pfe:PSF113_5049 1.2e-20 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.633
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.628
KXA15751.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.607
KXA15745.1
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase; KEGG: fnu:FN1790 4.9e-49 Cob(I)alamin adenosyltransferase K00798; Psort location: Cytoplasmic, score: 9.97.
       0.568
KXA14811.1
KEGG: rlt:Rleg2_4805 3.9e-18 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.531
KXA15753.1
Peptidase, M48 family; KEGG: fnu:FN0920 2.5e-116 protease HTPX K03799; Psort location: CytoplasmicMembrane, score: 10.00.
       0.432
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
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