STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15600.1KEGG: fnu:FN0047 4.6e-108 exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97. (250 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
 
 0.989
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.911
KXA16754.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
    
 0.900
KXA15598.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 4.8e-106 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 8.96.
       0.759
KXA15599.1
Hydrogenase maturation GTPase HydF; KEGG: twi:Thewi_2719 5.7e-17 tRNA modification GTPase mnmE; K03650 tRNA modification GTPase; Psort location: Cytoplasmic, score: 9.12.
       0.759
KXA15601.1
Putative sirohydrochlorin cobaltochelatase; KEGG: ipo:Ilyop_2622 1.6e-66 anaerobic cobaltochelatase K02190; Psort location: Cytoplasmic, score: 8.96.
       0.741
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
   
 0.741
KXA16485.1
KEGG: fnu:FN0536 2.4e-88 DNA polymerase III subunit beta K02338; Psort location: Cytoplasmic, score: 9.97.
   
 0.738
KXA16113.1
KEGG: fnu:FN0617 2.6e-75 DNA polymerase III subunit beta K02338; Psort location: Cytoplasmic, score: 9.97.
   
 0.738
KXA13455.1
Pseudouridylate synthase; KEGG: fnu:FN0756 8.8e-66 ribosomal large subunit pseudouridine synthase B K06178; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family.
  
    0.705
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
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