STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA14328.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (52 aa)    
Predicted Functional Partners:
KXA14329.1
CRISPR-associated endoribonuclease Cas6; Psort location: Cytoplasmic, score: 8.96.
       0.752
KXA14330.1
CRISPR-associated cxxc_cxxc protein Cst1; KEGG: abb:ABBFA_002186 0.00038 UvrD/REP helicase family protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 8.96.
       0.716
KXA14331.1
CRISPR-associated regulatory protein, DevR family; Psort location: Cytoplasmic, score: 8.96.
       0.666
KXA14332.1
CRISPR-associated protein Cas5, Tneap subtype; Psort location: Cytoplasmic, score: 8.96.
       0.666
KXA14327.1
Hypothetical protein.
       0.564
KXA14333.1
CRISPR-associated helicase Cas3; KEGG: clu:CLUG_01820 0.0075 hypothetical protein; K01529; Psort location: Cytoplasmic, score: 8.96.
       0.519
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.