STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA13872.1Ser/Thr phosphatase family protein; KEGG: fnu:FN0523 2.0e-82 exonuclease SbcD K03547; Psort location: Cytoplasmic, score: 8.96. (387 aa)    
Predicted Functional Partners:
KXA13873.1
RecF/RecN/SMC protein; KEGG: fnu:FN0522 5.7e-174 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.988
KXA13871.1
Hypothetical protein; KEGG: fnu:FN0524 1.5e-173 DNA helicase II K03657; Psort location: Cytoplasmic, score: 9.97; Belongs to the helicase family. UvrD subfamily.
 
 
 
 0.925
KXA13866.1
Hypothetical protein; KEGG: dth:DICTH_1416 0.00054 topA; DNA topoisomerase I K03168.
 
  
 0.905
KXA16487.1
KEGG: ipo:Ilyop_1126 9.8e-186 ATP-dependent DNA helicase, RecQ-like protein K03654; Psort location: Cytoplasmic, score: 9.97.
   
 0.896
KXA13867.1
UvrD/REP helicase; KEGG: cla:Cla_0382 9.2e-51 recombination protein RecB; K03582 exodeoxyribonuclease V beta subunit; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.878
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.799
KXA13870.1
Penicillin-binding protein, 1A family; KEGG: fnu:FN0525 3.2e-191 penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82.
       0.791
queH
Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
       0.777
KXA13875.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.777
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
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