STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiDCobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (374 aa)    
Predicted Functional Partners:
KXA13666.1
CbiG protein; KEGG: fnu:FN0952 2.5e-116 cobalamin biosynthesis protein CbiG; K02189 cobalt-precorrin 5A hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.994
KXA13667.1
KEGG: fnu:FN0957 3.8e-113 precorrin-4 C11-methyltransferase K05936; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.990
KXA13670.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; KEGG: fnu:FN0966 2.3e-51 precorrin-6Y C5,15-methyltransferase [decarboxylating] K03399; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.990
KXA13664.1
precorrin-6A reductase; KEGG: fnu:FN0950 4.9e-88 precorrin-6x reductase K05895; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.989
KXA13665.1
KEGG: fnu:FN0951 1.0e-103 precorrin-3B C17-methyltransferase K05934; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.989
KXA13669.1
precorrin-6Y C5,15-methyltransferase, CbiT subunit; KEGG: fnu:FN0964 2.2e-76 precorrin-8W decarboxylase K02191; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.983
KXA13672.1
KEGG: fnu:FN0970 1.9e-95 precorrin-8X methylmutase K06042; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.982
KXA13668.1
Precorrin-2 C(20)-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway.
 
  
 0.979
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.956
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.887
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.