STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA13476.1STAS domain protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the anti-sigma-factor antagonist family. (116 aa)    
Predicted Functional Partners:
KXA13475.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ipo:Ilyop_1385 1.9e-31 putative anti-sigma regulatory factor; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 8.96.
 
 0.996
KXA16895.1
Stage II sporulation protein E; KEGG: lbi:LEPBI_I1575 3.9e-43 putative phosphodiesterase or phosphatase K07315; Psort location: Cytoplasmic, score: 8.96.
 
 0.983
KXA13474.1
Hypothetical protein.
       0.774
rny
YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay.
       0.738
KXA15598.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 4.8e-106 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 8.96.
   
    0.685
KXA13495.1
KEGG: hor:Hore_19320 3.8e-49 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 8.96.
   
    0.685
KXA13098.1
KEGG: ppo:PPM_0977 3.4e-39 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: Cytoplasmic, score: 9.97.
    
 0.636
obg
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
     
 0.605
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.569
KXA16102.1
Hypothetical protein; KEGG: apv:Apar_0732 0.0058 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.506
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
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