STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA13512.1Hypothetical protein; KEGG: fnu:FN0714 6.5e-102 NADH oxidase K00540; Psort location: Cytoplasmic, score: 9.97. (317 aa)    
Predicted Functional Partners:
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
 
     0.803
KXA13513.1
Putative 16S pseudouridylate synthase; KEGG: fnu:FN0717 1.0e-80 ribosomal small subunit pseudouridine synthase A K06183; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family.
       0.785
KXA13511.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: fnu:FN1128 3.8e-223 acylamino acid-releasing enzyme K01303; Psort location: Cytoplasmic, score: 9.97.
       0.779
KXA13515.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.778
KXA13514.1
Hypothetical protein.
       0.776
KXA13465.1
Rubredoxin; KEGG: fnu:FN1424 1.4e-282 acyl-CoA dehydrogenase K00248; Psort location: Cytoplasmic, score: 9.97.
  
 0.762
KXA13507.1
Putative peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.760
KXA13509.1
Putative geranyltranstransferase; KEGG: ipo:Ilyop_1438 2.4e-79 polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.97.
     
 0.760
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.759
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.755
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
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