STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF32066.1Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. (468 aa)    
Predicted Functional Partners:
SHE55486.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.615
SHF69234.1
Membrane fusion protein, multidrug efflux system.
 
   0.559
SHE88131.1
Membrane fusion protein, multidrug efflux system.
 
   0.514
SHG26673.1
HlyD family secretion protein.
  
   0.451
SHF32101.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
       0.420
SHE43656.1
Glucose-1-phosphatase.
  
     0.418
Your Current Organism:
Dysgonomonas macrotermitis
NCBI taxonomy Id: 1346286
Other names: D. macrotermitis, DSM 27370, Dysgonomonas macrotermitis Yang et al. 2014, Dysgonomonas sp. Dys-CH1, JCM 19375, strain Dys-CH1
Server load: low (12%) [HD]