STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF43511.1Starch-binding associating with outer membrane. (478 aa)    
Predicted Functional Partners:
SHF43543.1
TonB-linked outer membrane protein, SusC/RagA family.
     0.885
SHE42786.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.770
SHF04229.1
Starch-binding associating with outer membrane.
  
 
   0.762
SHF88872.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.747
SHG16247.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.715
SHE70930.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.697
SHE70990.1
Starch-binding associating with outer membrane.
  
 
   0.680
SHE72180.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.678
SHF04268.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.671
SHF89109.1
Hypothetical protein.
  
 
   0.656
Your Current Organism:
Dysgonomonas macrotermitis
NCBI taxonomy Id: 1346286
Other names: D. macrotermitis, DSM 27370, Dysgonomonas macrotermitis Yang et al. 2014, Dysgonomonas sp. Dys-CH1, JCM 19375, strain Dys-CH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.