STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDG51700.1Branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein. (246 aa)    
Predicted Functional Partners:
CDG51699.1
ABC-type transport system permease protein II; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
CDG51698.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
CDG51697.1
ABC superfamily ATP binding cassette transporter periplasmic substrate-binding protein.
 
 
  0.966
CDG55651.1
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.933
CDG51701.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 
0.923
CDG51039.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.911
livM
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.909
CDG52753.1
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.886
CDG51038.1
High-affinity branched-chain amino acid transport system permease protein livH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.879
CDG53649.1
Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.865
Your Current Organism:
Halomonas sp. A3H3
NCBI taxonomy Id: 1346287
Other names: H. sp. A3H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.