STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1028Anaerobic sulfatase-maturating enzyme; Arylsulfatase regulator (Fe-S oxidoreductase). (389 aa)    
Predicted Functional Partners:
ACPL_1135
Hypothetical protein.
     0.629
ACPL_1145
Superfamily I DNA and RNA helicases and helicase subunits.
  
   
 0.549
ACPL_1140
Hypothetical protein.
  
     0.536
leuA
Isopropylmalate/homocitrate/citramalate synthases; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.471
ACPL_3319
Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.
  
     0.469
ACPL_7590
O-acetyltransferase oatA; Predicted acyltransferases.
  
     0.467
ACPL_1499
Nephrocystin-3; FOG: TPR repeat.
 
     0.465
ACPL_1141
Hypothetical protein.
  
     0.463
ACPL_3877
RNA polymerase, sigma-24 subunit, ECF subfamily.
  
     0.461
pseT
Polynucleotide 5'-hydroxyl-kinase; Adenylylsulfate kinase and related kinases.
  
     0.438
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.