manC protein (Actinoplanes sp. SE50110) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

manC

Mannose-1-phosphate guanylyltransferase. (373 aa)

Predicted Functional Partners:

manB

0.973

pmmB

0.940

ugd

0.906

udgA

0.899

ACPL_3099

0.886

ACPL_7785

0.886

rfbP

0.886

gtaB

0.868

galE-3

0.867

ACPL_3097

0.861

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACPL_3097	ACPL_3099	ACPL_3097	ACPL_3099	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	0.677
ACPL_3097	ACPL_7785	ACPL_3097	ACPL_7785	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	0.478
ACPL_3097	galE-3	ACPL_3097	ACPL_7778	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.887
ACPL_3097	gtaB	ACPL_3097	ACPL_7811	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase.	0.924
ACPL_3097	manC	ACPL_3097	ACPL_1044	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	Mannose-1-phosphate guanylyltransferase.	0.861
ACPL_3097	rfbP	ACPL_3097	ACPL_8277	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	0.478
ACPL_3097	udgA	ACPL_3097	ACPL_3100	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	Predicted UDP-glucose 6-dehydrogenase.	0.968
ACPL_3097	ugd	ACPL_3097	ACPL_2581	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	UDPglucose 6-dehydrogenase; UDP-N-acetyl-D-mannosaminuronate dehydrogenase.	0.949
ACPL_3099	ACPL_3097	ACPL_3099	ACPL_3097	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	0.677
ACPL_3099	ACPL_7785	ACPL_3099	ACPL_7785	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	0.643
ACPL_3099	galE-3	ACPL_3099	ACPL_7778	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.560
ACPL_3099	gtaB	ACPL_3099	ACPL_7811	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase.	0.493
ACPL_3099	manB	ACPL_3099	ACPL_1059	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Phosphomannomutase.	0.518
ACPL_3099	manC	ACPL_3099	ACPL_1044	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Mannose-1-phosphate guanylyltransferase.	0.886
ACPL_3099	pmmB	ACPL_3099	ACPL_7740	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Phosphomannomutase.	0.518
ACPL_3099	rfbP	ACPL_3099	ACPL_8277	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	0.643
ACPL_3099	udgA	ACPL_3099	ACPL_3100	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Predicted UDP-glucose 6-dehydrogenase.	0.846
ACPL_7785	ACPL_3097	ACPL_7785	ACPL_3097	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.	0.478
ACPL_7785	ACPL_3099	ACPL_7785	ACPL_3099	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	0.643
ACPL_7785	galE-3	ACPL_7785	ACPL_7778	Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.563