STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1084y4bA/y4pH-like uncharacterized protein; Site-specific recombinases, DNA invertase Pin homologs. (599 aa)    
Predicted Functional Partners:
ACPL_5691
PRC-barrel domain protein; Uncharacterized protein conserved in bacteria.
  
    0.505
ACPL_3499
Hypothetical protein; Predicted ATPase.
 
    0.482
ACPL_1085
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
     
 0.450
ACPL_1086
Hypothetical protein.
       0.445
ACPL_1087
Hypothetical protein.
       0.445
ACPL_1088
Hypothetical protein.
       0.445
ACPL_1342
Bacillopeptidase F; Subtilisin-like serine proteases.
 
     0.434
ACPL_5771
Hypothetical protein.
  
     0.427
ACPL_5774
Hypothetical protein.
  
     0.406
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.