Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1085DNA segregation ATPase FtsK/SpoIIIE and related proteins. (577 aa)    
Predicted Functional Partners:
ACPL_1086
Hypothetical protein.
       0.790
ACPL_1087
Hypothetical protein.
       0.773
ACPL_1088
Hypothetical protein.
       0.773
ACPL_1448
ADAM 12 protein.
  
     0.636
ACPL_4423
Hypothetical protein.
  
     0.595
ACPL_7802
Filamentous hemagglutinin; GTPase-activating protein.
  
     0.589
ACPL_3541
Hypothetical protein.
  
  
 0.576
ACPL_7621
Hypothetical protein.
  
     0.572
ACPL_5859
Collagen alpha-4(VI) chain; Type V secretory pathway, adhesin AidA.
  
  
 0.569
ACPL_6332
Hypothetical protein; Zn-dependent proteases.
  
     0.556
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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