STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1133Nephrocystin-3; FOG: TPR repeat. (806 aa)    
Predicted Functional Partners:
ACPL_1135
Hypothetical protein.
 
     0.738
ACPL_3980
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 0.661
dnaK-3
Molecular chaperone.
  
 0.596
ACPL_1132
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
  
    0.563
ACPL_6712
Serine/threonine protein kinase.
  
 
 0.551
ACPL_4783
Nephrocystin-3; FOG: TPR repeat.
  
 
0.536
ACPL_4883
Putative disease resistance protein RDL5/RF45; Predicted ATPase.
  
 
0.531
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.516
ACPL_5020
Pectate lyase.
  
    0.513
ACPL_6128
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
 
  0.502
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.