Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1137Hypothetical protein. (157 aa)    
Predicted Functional Partners:
ACPL_3217
Hypothetical protein.
  
     0.773
ACPL_5759
Hypothetical protein.
  
     0.768
ACPL_644
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.767
ACPL_646
Hypothetical protein.
 
     0.767
ACPL_4336
Hypothetical protein; Predicted GTPases (dynamin-related).
  
    0.698
ACPL_2589
Heat shock cognate 71 kDa protein; Molecular chaperone.
 
     0.691
ACPL_4337
Hypothetical protein; Translation elongation factors (GTPases).
  
     0.630
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
  
 0.626
ACPL_1138
Hypothetical protein.
       0.615
ACPL_1135
Hypothetical protein.
 
     0.584
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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