Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1141Hypothetical protein. (469 aa)    
Predicted Functional Partners:
ACPL_1140
Hypothetical protein.
 
     0.968
ACPL_1145
Superfamily I DNA and RNA helicases and helicase subunits.
 
     0.872
ACPL_7053
Hypothetical protein; Predicted transmembrane transcriptional regulator (anti-sigma factor).
  
     0.616
ACPL_2396
Hypothetical protein.
  
     0.557
cd14
Monocyte differentiation antigen CD14.
  
     0.555
ACPL_5867
GCN5-related N-acetyltransferase; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.548
ACPL_1139
Uncharacterized protein conserved in bacteria.
       0.532
ACPL_6928
Hypothetical protein; FOG: PAS/PAC domain.
  
     0.517
ACPL_4586
Sulfurtransferase tusA; Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
     0.515
ACPL_7250
Protein of unknown function DUF820; Uncharacterized protein conserved in cyanobacteria.
  
     0.511
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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