STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clpSATP-dependent Clp protease adapter protein clpS; Belongs to the ClpS family. (72 aa)    
Predicted Functional Partners:
ACPL_1164
Uncharacterized protein; 4-aminobutyrate aminotransferase and related aminotransferases.
 
  
 0.931
ACPL_2699
DNA protection during starvation protein; DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
   
 
 0.906
ACPL_1165
Mov34/MPN/PAD-1 family protein; Predicted metal-dependent protease of the PAD1/JAB1 superfamily.
       0.819
clpC-2
clpA-like ATP-dependent Clp protease; ATPases with chaperone activity, ATP-binding subunit.
 
 
 0.738
clpB
ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.704
ACPL_4294
Uncharacterized protein; ATPases with chaperone activity, ATP-binding subunit.
  
 
 0.704
clpC
ATP-dependent Clp protease ATP-binding subunit clpC; ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
  
 
 0.704
ACPL_6849
Clp domain protein.
  
 
 0.704
clpC-3
Chaperone protein clpB; ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
  
 
 0.704
ACPL_1166
Uncharacterized protein; Molybdopterin converting factor, small subunit.
     
 0.684
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.