STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1164Uncharacterized protein; 4-aminobutyrate aminotransferase and related aminotransferases. (166 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adapter protein clpS; Belongs to the ClpS family.
 
  
 0.931
ACPL_1165
Mov34/MPN/PAD-1 family protein; Predicted metal-dependent protease of the PAD1/JAB1 superfamily.
 
     0.921
ACPL_5072
Predicted transcriptional regulators.
  
  
 0.869
cysM
Cysteine synthase.
     
 0.695
phoR-7
Signal transduction histidine kinase.
  
    0.678
ACPL_1166
Uncharacterized protein; Molybdopterin converting factor, small subunit.
       0.677
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
       0.615
pncA
Nicotinamidase/pyrazinamidase; Amidases related to nicotinamidase.
       0.613
ACPL_547
Uncharacterized protein.
  
     0.579
ACPL_7758
Mini-circle putative transposase for IS117.
  
     0.556
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.