Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_1190Putative copper export protein. (553 aa)    
Predicted Functional Partners:
ACPL_3017
Uncharacterized protein conserved in bacteria.
 
  
 0.972
ACPL_5110
Nuclear export factor GLE1.
  
  
 0.961
ACPL_8044
Regulator of G-protein signaling 12.
 
  
 0.718
ycdB
Predicted iron-dependent peroxidase.
 
  
 0.702
ACPL_8029
Protein piccolo; Translation initiation factor 2 (IF-2; GTPase).
 
   
 0.699
efeB
Peroxidase ycdB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.695
ACPL_2628
Dyp-type peroxidase family protein; Predicted iron-dependent peroxidase.
  
  
 0.655
ACPL_3883
Uncharacterized iron-regulated membrane protein.
  
    0.652
ACPL_7869
Nipped-B-like protein.
  
     0.615
sigC
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.602
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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