STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pclOPredicted membrane protein. (1508 aa)    
Predicted Functional Partners:
ACPL_1190
Putative copper export protein.
       0.615
ACPL_4008
Predicted membrane protein.
  
     0.592
ACPL_1812
GCN5-related N-acetyltransferase; Predicted acetyltransferase.
 
     0.546
ACPL_3525
Hypothetical protein.
  
     0.543
ACPL_4802
Neogenin; Fibronectin type 3 domain-containing protein.
  
     0.455
ACPL_2058
Zinc transporter 8; Co/Zn/Cd efflux system component.
   
    0.451
ACPL_6958
Hypothetical protein.
   
    0.451
ACPL_4864
Lipoate-protein ligase A.
  
     0.445
sigC
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.428
ACPL_5686
Hypothetical protein.
 
     0.416
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.