Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1214Uncharacterized protein conserved in bacteria. (640 aa)    
Predicted Functional Partners:
ACPL_1215
Hypothetical protein.
 
  
 0.978
ACPL_1213
Chromosome partition protein smc; ATPase involved in DNA repair.
 
   
 0.967
ACPL_1930
Membrane protein implicated in regulation of membrane protease activity.
  
  
 0.659
ACPL_1165
Mov34/MPN/PAD-1 family protein; Predicted metal-dependent protease of the PAD1/JAB1 superfamily.
    
  0.630
ACPL_6712
Serine/threonine protein kinase.
  
 
 0.590
ACPL_7184
Laminin subunit beta-1; Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
  
  
 0.590
ACPL_1216
y4lL-like uncharacterized protein; FOG: GGDEF domain.
       0.570
htpG
Chaperone protein htpG; Molecular chaperone, HSP90 family.
     
  0.508
htpG-2
Chaperone protein htpG; Molecular chaperone. Has ATPase activity.
     
  0.508
ACPL_3161
Hypothetical protein.
    
 0.487
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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