STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1214Uncharacterized protein conserved in bacteria. (640 aa)    
Predicted Functional Partners:
ACPL_1215
Hypothetical protein.
 
  
 0.977
ACPL_1213
Chromosome partition protein smc; ATPase involved in DNA repair.
 
   
 0.971
ACPL_1930
Membrane protein implicated in regulation of membrane protease activity.
  
  
 0.716
ACPL_1216
y4lL-like uncharacterized protein; FOG: GGDEF domain.
       0.570
ACPL_7184
Laminin subunit beta-1; Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
  
  
 0.569
ACPL_2384
Sporulation-control protein spo0M; Sporulation control protein.
  
    0.449
ACPL_8205
Hypothetical protein.
  
 
 0.431
ACPL_7138
Sporulation-control protein spo0M; Sporulation control protein.
  
    0.430
ACPL_6712
Serine/threonine protein kinase.
  
 
  0.429
ACPL_1217
Hypothetical protein; Type IV secretory pathway, VirB6 components.
       0.414
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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