Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
xyoAFAD linked oxidase domain protein; FAD/FMN-containing dehydrogenases. (407 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
  0.922
ACPL_6369
Threonine dehydrogenase and related Zn-dependent dehydrogenases.
    
 0.900
abfA
alpha-N-arabinofuranosidase; Alpha-L-arabinofuranosidase.
  
  
  0.827
ACPL_3008
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 
  0.804
ACPL_2739
alpha-L-arabinofuranosidase B catalytic.
    
  0.802
ACPL_4729
alpha-L-arabinofuranosidase B catalytic; O-Glycosyl hydrolase.
    
  0.802
ACPL_4741
Hypothetical protein.
    
  0.802
ACPL_1674
Glucokinase; Transcriptional regulator/sugar kinase.
     
  0.800
ACPL_4742
alpha-L-arabinofuranosidase B catalytic; Endoglucanase.
     
  0.800
glcK
ROK family protein; Transcriptional regulator/sugar kinase.
     
  0.800
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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