Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACPL_1247Putative secreted protein. (210 aa)    
Predicted Functional Partners:
ACPL_1246
Hypothetical protein.
 
     0.949
ACPL_1801
Polycystic kidney disease protein 1-like 3; Exoribonuclease R.
  
     0.695
ACPL_5314
Methionine synthase I, cobalamin-binding domain.
  
     0.592
ACPL_1245
Hypothetical protein.
       0.576
ACPL_1250
Hypothetical protein.
 
     0.539
ACPL_1249
roadblock/LC7 family protein; Uncharacterized distant relative of homeotic protein bithoraxoid.
 
     0.509
lieB
Leupeptin-inactivating enzyme 2; Zinc metalloprotease (elastase).
  
     0.507
ACPL_389
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.501
ACPL_5152
Uncharacterized protein conserved in bacteria.
  
     0.501
prsR
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.496
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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