Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_1250Hypothetical protein. (116 aa)    
Predicted Functional Partners:
ACPL_1249
roadblock/LC7 family protein; Uncharacterized distant relative of homeotic protein bithoraxoid.
 
   
 0.942
phyB
Phytochrome B; Signal transduction histidine kinase.
 
     0.936
ACPL_1251
Translation initiation factor IF-2; Predicted GTPase.
 
  
 0.934
fadB
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase.
  
 0.870
fadB-2
3-hydroxyacyl-CoA dehydrogenase.
  
 0.870
ACPL_828
Histidine kinase; Bacteriophytochrome (light-regulated signal transduction histidine kinase).
 
 0.832
ACPL_7763
Sensor protein torS; Signal transduction histidine kinase.
 
 0.829
ACPL_2136
Hypothetical protein; Uncharacterized distant relative of homeotic protein bithoraxoid.
 
    0.811
ACPL_8150
Hypothetical protein; Uncharacterized distant relative of homeotic protein bithoraxoid.
 
    0.808
ACPL_7762
Hypothetical protein; Uncharacterized distant relative of homeotic protein bithoraxoid.
 
    0.806
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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