STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1263Hypothetical protein; Predicted phosphoesterases, related to the Icc protein. (250 aa)    
Predicted Functional Partners:
ACPL_1265
Hypothetical protein.
 
     0.977
ACPL_1264
Hypothetical protein.
       0.907
ACPL_1262
Hypothetical protein.
       0.772
ACPL_1266
Thymidylate kinase; ABC-type sugar transport systems, ATPase components.
 
     0.631
ACPL_5151
Hypothetical protein.
  
     0.504
nadR
Transcriptional regulator nadR; FAD synthase.
       0.461
ACPL_3707
Sensor histidine kinase/response regulator; FOG: HAMP domain.
  
   
 0.437
ACPL_260
Hypothetical protein.
  
     0.414
ACPL_398
GAF sensor hybrid histidine kinase; FOG: HAMP domain.
  
     0.407
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.