STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1265Hypothetical protein. (191 aa)    
Predicted Functional Partners:
ACPL_1263
Hypothetical protein; Predicted phosphoesterases, related to the Icc protein.
 
     0.977
ACPL_1264
Hypothetical protein.
       0.863
ACPL_1262
Hypothetical protein.
       0.770
ACPL_1266
Thymidylate kinase; ABC-type sugar transport systems, ATPase components.
 
     0.619
ACPL_2659
Hypothetical protein.
  
     0.586
ACPL_1273
yngL-like uncharacterized protein.
 
     0.538
ACPL_4354
Endonuclease/exonuclease/phosphatase; Exonuclease III.
 
     0.528
galE-2
UDP-glucose 4-epimerase; dTDP-D-glucose 4,6-dehydratase.
 
     0.517
erf1
Peptide chain release factor 1 (eRF1).
 
     0.495
ACPL_2536
Hypothetical protein.
  
     0.493
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.