STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1286Hypothetical protein. (332 aa)    
Predicted Functional Partners:
ACPL_6762
Hypothetical protein.
  
     0.723
ACPL_7055
Hypothetical protein.
 
     0.675
prsR-3
Anti-sigma F factor; Signal transduction histidine kinase.
  
     0.655
ACPL_6741
Hypothetical protein.
 
     0.637
ACPL_6791
Endonuclease/exonuclease/phosphatase; Exonuclease III.
  
     0.634
ACPL_2093
Nucleoporin; PPE-repeat proteins.
  
     0.632
ACPL_1182
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
  
     0.622
ACPL_225
Hypothetical protein.
  
     0.619
ACPL_5133
Uncharacterized protein conserved in bacteria.
 
     0.615
ACPL_8314
Hypothetical protein.
  
     0.609
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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