STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_131Hypothetical protein. (148 aa)    
Predicted Functional Partners:
ACPL_6437
Hypothetical protein.
  
     0.654
sapM
Acid phosphatase.
  
     0.574
ACPL_130
Signal transduction histidine kinase.
       0.557
ACPL_129
Transcriptional regulatory protein degU; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.549
sapM-2
Acid phosphatase.
  
     0.546
ACPL_2847
Transcriptional regulators.
  
     0.511
ACPL_1111
Regulatory protein; FOG: TPR repeat.
  
     0.474
ACPL_4906
Hypothetical protein; Acetyltransferases.
  
     0.468
nicT
High-affinity nickel transport protein.
  
     0.467
ACPL_3275
Hypothetical protein.
  
     0.463
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.