Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1349Hypothetical protein. (429 aa)    
Predicted Functional Partners:
ACPL_1350
Hypothetical protein.
       0.773
ACPL_8126
Hypothetical protein.
  
     0.758
ACPL_6632
Hypothetical protein.
  
     0.649
ACPL_5286
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
     0.594
ACPL_7434
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
     0.536
ACPL_3487
Hypothetical protein.
  
     0.532
ACPL_4114
Transcriptional regulator, LuxR family; Predicted ATPase.
  
     0.525
ACPL_228
Hydroxysteroid dehydrogenase-like protein 2; Putative sterol carrier protein.
  
     0.504
ACPL_1880
Hypothetical protein.
  
     0.488
ACPL_4015
Signal transduction protein; Predicted NTPase (NACHT family).
  
     0.488
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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