Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACPL_1356 | ACPL_1357 | ACPL_1356 | ACPL_1357 | Hypothetical protein. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | 0.691 |
| ACPL_1356 | clpX | ACPL_1356 | ACPL_1355 | Hypothetical protein. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.603 |
| ACPL_1357 | ACPL_1356 | ACPL_1357 | ACPL_1356 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | Hypothetical protein. | 0.691 |
| ACPL_1357 | baeN | ACPL_1357 | ACPL_6194 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins. | 0.443 |
| ACPL_1357 | clpX | ACPL_1357 | ACPL_1355 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.729 |
| ACPL_1357 | gltB | ACPL_1357 | ACPL_1813 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | Glutamate synthase domain 2. | 0.433 |
| ACPL_1357 | guaA | ACPL_1357 | ACPL_873 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.495 |
| ACPL_1357 | ilvE | ACPL_1357 | ACPL_7365 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.566 |
| baeN | ACPL_1357 | ACPL_6194 | ACPL_1357 | Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | 0.443 |
| baeN | gltB | ACPL_6194 | ACPL_1813 | Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins. | Glutamate synthase domain 2. | 0.617 |
| baeN | ilvE | ACPL_6194 | ACPL_7365 | Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.472 |
| clpX | ACPL_1356 | ACPL_1355 | ACPL_1356 | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Hypothetical protein. | 0.603 |
| clpX | ACPL_1357 | ACPL_1355 | ACPL_1357 | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | 0.729 |
| clpX | gltB | ACPL_1355 | ACPL_1813 | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Glutamate synthase domain 2. | 0.539 |
| clpX | guaA | ACPL_1355 | ACPL_873 | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.514 |
| gltB | ACPL_1357 | ACPL_1813 | ACPL_1357 | Glutamate synthase domain 2. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Predicted amidohydrolase. | 0.433 |
| gltB | baeN | ACPL_1813 | ACPL_6194 | Glutamate synthase domain 2. | Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins. | 0.617 |
| gltB | clpX | ACPL_1813 | ACPL_1355 | Glutamate synthase domain 2. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.539 |
| gltB | guaA | ACPL_1813 | ACPL_873 | Glutamate synthase domain 2. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.926 |
| gltB | ilvE | ACPL_1813 | ACPL_7365 | Glutamate synthase domain 2. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.585 |
page 1 of 2