STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1371Hypothetical protein. (114 aa)    
Predicted Functional Partners:
ACPL_1370
Multi-sensor signal transduction histidine kinase; Serine phosphatase RsbU, regulator of sigma subunit.
  
   0.861
ACPL_4649
Response regulator receiver sensor signal transduction histidine kinase; Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.770
ACPL_397
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.721
ACPL_3780
Magnesium or manganese-dependent protein phosphatase; FOG: PAS/PAC domain.
  
 
 0.716
ACPL_1372
Radical SAM domain protein; Fe-S oxidoreductase.
       0.706
ACPL_381
Phosphoserine phosphatase rsbX; Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 
 0.701
ACPL_1369
Carboxylesterase bioH; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.691
ACPL_2318
Signal transduction histidine kinase.
  
  
 0.573
ACPL_1373
Uncharacterized protein conserved in bacteria.
       0.551
ACPL_7226
Multi-sensor signal transduction histidine kinase; Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.551
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.