Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1395Protein kinase 3. (343 aa)    
Predicted Functional Partners:
ACPL_1396
Hypothetical protein.
       0.563
ACPL_3161
Hypothetical protein.
    
  0.476
ACPL_6712
Serine/threonine protein kinase.
    
  0.476
ACPL_918
Hypothetical protein; ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.441
ACPL_920
Hypothetical protein; ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.425
tfxG
Trifolitoxin immunity protein.
 
 
   0.422
pclO-3
Protein piccolo; Putative stress-responsive transcriptional regulator.
  
     0.415
ACPL_7732
GCN5-related N-acetyltransferase; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.406
ACPL_7994
Hypothetical protein.
  
     0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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