Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACPL_1415 | ACPL_1416 | ACPL_1415 | ACPL_1416 | Hemolysins and related proteins containing CBS domains. | Hypothetical protein. | 0.918 |
| ACPL_1415 | era | ACPL_1415 | ACPL_1417 | Hemolysins and related proteins containing CBS domains. | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.871 |
| ACPL_1415 | phoH | ACPL_1415 | ACPL_1413 | Hemolysins and related proteins containing CBS domains. | PhoH-like protein; Phosphate starvation-inducible protein PhoH, predicted ATPase. | 0.831 |
| ACPL_1415 | ybeY | ACPL_1415 | ACPL_1414 | Hemolysins and related proteins containing CBS domains. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.939 |
| ACPL_1416 | ACPL_1415 | ACPL_1416 | ACPL_1415 | Hypothetical protein. | Hemolysins and related proteins containing CBS domains. | 0.918 |
| ACPL_1416 | era | ACPL_1416 | ACPL_1417 | Hypothetical protein. | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.968 |
| ACPL_1416 | phoH | ACPL_1416 | ACPL_1413 | Hypothetical protein. | PhoH-like protein; Phosphate starvation-inducible protein PhoH, predicted ATPase. | 0.864 |
| ACPL_1416 | ybeY | ACPL_1416 | ACPL_1414 | Hypothetical protein. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.979 |
| era | ACPL_1415 | ACPL_1417 | ACPL_1415 | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hemolysins and related proteins containing CBS domains. | 0.871 |
| era | ACPL_1416 | ACPL_1417 | ACPL_1416 | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein. | 0.968 |
| era | phoH | ACPL_1417 | ACPL_1413 | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | PhoH-like protein; Phosphate starvation-inducible protein PhoH, predicted ATPase. | 0.889 |
| era | ybeY | ACPL_1417 | ACPL_1414 | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.978 |
| phoH | ACPL_1415 | ACPL_1413 | ACPL_1415 | PhoH-like protein; Phosphate starvation-inducible protein PhoH, predicted ATPase. | Hemolysins and related proteins containing CBS domains. | 0.831 |
| phoH | ACPL_1416 | ACPL_1413 | ACPL_1416 | PhoH-like protein; Phosphate starvation-inducible protein PhoH, predicted ATPase. | Hypothetical protein. | 0.864 |
| phoH | era | ACPL_1413 | ACPL_1417 | PhoH-like protein; Phosphate starvation-inducible protein PhoH, predicted ATPase. | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.889 |
| phoH | ybeY | ACPL_1413 | ACPL_1414 | PhoH-like protein; Phosphate starvation-inducible protein PhoH, predicted ATPase. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.972 |
| rplM | rplO | ACPL_833 | ACPL_801 | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.998 |
| rplM | rplQ | ACPL_833 | ACPL_812 | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L17. | 0.996 |
| rplM | rplU | ACPL_833 | ACPL_1376 | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
| rplM | rplX | ACPL_833 | ACPL_793 | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.994 |
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