STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1419Protein liaG. (254 aa)    
Predicted Functional Partners:
ACPL_2409
YkuD-like spore protein; Uncharacterized protein conserved in bacteria.
  
     0.713
ACPL_1018
Hypothetical protein.
  
     0.629
ACPL_3518
Hypothetical protein; FOG: PAS/PAC domain.
  
     0.560
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
       0.558
ACPL_1421
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.556
ACPL_770
Hypothetical protein.
 
    0.546
ACPL_7046
[Protein-PII] uridylyltransferase; Malic enzyme.
  
     0.538
ACPL_644
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.527
ACPL_1422
Phosphoglycerate mutase family member 5; Fructose-2,6-bisphosphatase.
       0.521
ACPL_416
Hypothetical protein.
 
     0.513
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.