STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1428Ribose import ATP-binding protein rbsA; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (467 aa)    
Predicted Functional Partners:
ACPL_1427
Putative permease ybaF; ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 0.998
ACPL_1429
Putative HMP/thiamine permease protein ykoE; Predicted membrane protein.
 
  
 0.983
ACPL_6678
Methionine import ATP-binding protein metN; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
  
0.835
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
    0.637
ACPL_2440
Uncharacterized protein; ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.573
ACPL_895
Uncharacterized protein.
  
     0.536
ACPL_882
Peptide/nickel transport system substrate-binding protein; ABC-type dipeptide transport system, periplasmic component.
  
  
 0.521
ACPL_2952
Phosphate import ATP-binding protein pstB; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
  
0.485
ACPL_6675
Methionine import ATP-binding protein metN; ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
  
0.460
ACPL_8128
Phosphate import ATP-binding protein pstB; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
  
0.460
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.