Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1434Predicted transcriptional regulators. (101 aa)    
Predicted Functional Partners:
fur
Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
  
 0.877
ACPL_1435
Chelated iron transport system membrane protein yfeD; ABC-type Mn2+/Zn2+ transport systems, permease components.
       0.844
mntB
Zinc transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
     
 0.817
ACPL_1432
Putative transmembrane protein.
       0.761
cadC-3
Cadmium efflux system accessory-like protein; Predicted transcriptional regulators.
  
     0.707
scbA
Metal ABC transporter substrate-binding lipoprotein; ABC-type metal ion transport system, periplasmic component/surface adhesin.
       0.693
ACPL_1438
Hypothetical protein.
       0.476
arsR
Predicted transcriptional regulators.
  
     0.406
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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