Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACPL_1455Spermidine/putrescine import ATP-binding protein potA; ABC-type spermidine/putrescine transport systems, ATPase components. (307 aa)    
Predicted Functional Partners:
ACPL_1456
Nodulation protein J; ABC-type multidrug transport system, permease component.
 
 
  0.994
nodJ
Nodulation protein J; ABC-type multidrug transport system, permease component.
 
 
  0.988
ACPL_1454
Hypothetical protein.
  
    0.777
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.767
dgt
dGTPase; dGTP triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
       0.640
pdr1
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
 
  0.621
pdr1-4
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
  
 0.606
drrB
Daunorubicin resistance transmembrane protein; ABC-type multidrug transport system, permease component.
 
 
 0.588
pdr1-2
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
 
 0.582
ACPL_4557
ABC-type multidrug transport system, permease component.
 
 
 0.573
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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