Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nodJNodulation protein J; ABC-type multidrug transport system, permease component. (269 aa)    
Predicted Functional Partners:
ACPL_1456
Nodulation protein J; ABC-type multidrug transport system, permease component.
 
  
 
0.993
ACPL_1455
Spermidine/putrescine import ATP-binding protein potA; ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
  0.988
pdr1-4
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
  
  0.835
pdr1
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
  
  
  0.830
ACPL_1428
Ribose import ATP-binding protein rbsA; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
 
  0.823
msmK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
     
 0.814
msiK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
     
 0.814
ACPL_1435
Chelated iron transport system membrane protein yfeD; ABC-type Mn2+/Zn2+ transport systems, permease components.
    
  0.811
pstS
Phosphate-binding protein pstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
    
 0.811
ACPL_2439
Phosphate import ATP-binding protein pstB; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
     
  0.808
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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