STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cah4Carbonic anhydrase; Similar to chloroplast protein; Carbonic anhydrase. (200 aa)    
Predicted Functional Partners:
st2
Carbonic anhydrase; Sulfate permease and related transporters (MFS superfamily).
 
 
 0.983
ACPL_4101
Carbonic anhydrase; Similar to chloroplast protein; Carbonic anhydrase.
    
 0.949
apt
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins.
   
  
 0.765
apt-2
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.765
cysE-2
Acetyltransferase; Isoleucine patch superfamily.
    
 
 0.639
ACPL_1516
2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase 2; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
   
 0.598
mutY
A/G-specific DNA glycosylase.
     
 0.580
ACPL_7310
N-acylneuraminate-9-phosphatase; Predicted hydrolase (HAD superfamily).
      
 0.504
leuB
Isocitrate/isopropylmalate dehydrogenase.
     
 0.408
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.