Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1519Hypothetical protein. (163 aa)    
Predicted Functional Partners:
nagA
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
       0.767
ACPL_1053
Hypothetical protein.
  
     0.760
ACPL_7087
Hypothetical protein.
  
     0.753
ACPL_1767
YggT family protein; Predicted integral membrane protein.
  
     0.751
ACPL_7111
Hypothetical protein.
  
     0.741
ACPL_405
Phosphoglycerate mutase; Fructose-2,6-bisphosphatase.
  
     0.733
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.694
ACPL_1392
DNA polymerase III, delta subunit.
  
     0.692
ACPL_7801
Dolichyl-phosphate-mannose-protein O-mannosyl transferase.
  
     0.688
ACPL_8118
Putative metallophosphoesterase; Predicted phosphohydrolases.
  
     0.682
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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