STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1544Epidermal growth factor receptor substrate 15-like 1; Zn-ribbon protein, possibly nucleic acid-binding. (244 aa)    
Predicted Functional Partners:
ACPL_1545
Bifunctional RNase H/acid phosphatase; Fructose-2,6-bisphosphatase.
 
  
 0.988
ACPL_1543
Uncharacterized protein.
  
  
 0.896
ACPL_1542
Coenzyme A biosynthesis bifunctional protein coaBC; Phosphopantothenoylcysteine synthetase/decarboxylase.
       0.772
ACPL_1541
Putative HTH-type transcriptional regulatory protein.
       0.715
ACPL_1646
Transcriptional regulatory protein ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.650
pafB
Proteasome accessory factor B; Predicted transcriptional regulator.
  
     0.580
ACPL_7993
Hypothetical protein.
  
     0.567
ACPL_1643
Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
   
 0.564
chiA
Chitinase; Belongs to the glycosyl hydrolase 18 family.
       0.560
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 0.551
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.