STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vanYPeptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; D-alanyl-D-alanine carboxypeptidase. (150 aa)    
Predicted Functional Partners:
ACPL_278
D-alanyl-D-alanine carboxypeptidase.
  
  
  0.950
dacC
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.906
dac
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.906
ACPL_1555
Hypothetical protein.
       0.658
ACPL_6964
Hypothetical protein.
  
     0.583
tdcB
Threonine dehydratase.
       0.571
ACPL_2617
Extracellular matrix-binding protein ebhB; Myosin heavy chain.
  
     0.570
gapA
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.528
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.