STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1574Predicted integral membrane protein. (386 aa)    
Predicted Functional Partners:
ACPL_1573
Hypothetical protein.
 
   
 0.816
ACPL_1575
Antibiotic transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
       0.625
ACPL_7854
Potassium channel protein 1; Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.587
ACPL_1683
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
 
   
 0.551
ACPL_1705
Hypothetical protein.
 
   
 0.527
ACPL_5124
Hypothetical protein.
  
   
 0.507
pksA
Transcriptional regulator.
  
    0.449
ACPL_1572
Hypothetical protein.
       0.431
ACPL_1796
Hypothetical protein.
  
     0.423
ACPL_1730
GCN5-related N-acetyltransferase; Acetyltransferases.
  
    0.420
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.