STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpAPeptidoglycan glycosyltransferase; Cell division protein FtsI/penicillin-binding protein 2. (499 aa)    
Predicted Functional Partners:
rodA
Bacterial cell division membrane protein; Belongs to the SEDS family.
 0.999
ftsW
Bacterial cell division membrane protein; Belongs to the SEDS family.
 0.963
dac-2
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4).
     
 0.954
ftsI
Cell division protein FtsI/penicillin-binding protein 2.
  
  
0.952
dac
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.949
dacC
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.948
ACPL_161
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
 
   
 0.925
ACPL_160
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
 
   
 0.913
pknB
Serine/threonine protein kinase.
     
 0.909
vanY
Peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; D-alanyl-D-alanine carboxypeptidase.
     
 0.903
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.