Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1661Hypothetical protein. (69 aa)    
Predicted Functional Partners:
ACPL_1662
STE24 endopeptidase; Zn-dependent protease with chaperone function.
       0.785
ACPL_1660
yacP-like uncharacterized protein; Predicted RNA-binding protein containing a PIN domain.
       0.591
ACPL_1659
DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex.
       0.586
ACPL_1663
Phosphatidylinositol alpha-1, 6-mannosyltransferase; Glycosyltransferase.
       0.458
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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