STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1682Putative homoserine kinase type II (protein kinase fold). (303 aa)    
Predicted Functional Partners:
ACPL_1683
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
       0.714
ACPL_7477
Homoserine dehydrogenase.
    
 0.554
ACPL_3844
Threonine synthase.
    
 0.536
ACPL_7475
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
    
 0.536
ACPL_7989
Threonine synthase.
    
 0.536
ACPL_1681
Anaerobic regulatory protein; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
       0.522
cobE
Protein cobE; Cobalamin biosynthesis protein CbiG.
  
    0.464
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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