STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_169yhcS-like uncharacterized protein; Polyketide synthase modules and related proteins. (916 aa)    
Predicted Functional Partners:
ACPL_168
Hypothetical protein.
     
 0.881
trpG
Anthranilate/para-aminobenzoate synthases component II.
       0.858
ACPL_170
Uncharacterized protein conserved in bacteria.
       0.844
whiP
whiP-like uncharacterized membrane protein; Involved in cell division; Belongs to the CrgA family.
       0.634
ACPL_6492
Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain.
  
     0.476
ACPL_2267
yebA-like uncharacterized protein; Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.451
ACPL_6491
Hypothetical protein.
  
     0.447
ACPL_2060
Calcineurin-binding protein cabin-1; Serine/threonine protein kinase.
     
 0.437
ACPL_1068
Lipoprotein lpqB.
  
     0.413
ACPL_5210
Collagen alpha-1(VII) chain; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
  
 0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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