STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1701Fibrocystin-L; FOG: Ankyrin repeat. (405 aa)    
Predicted Functional Partners:
qcrC
Cytochrome c, mono- and diheme variants.
   
 
 0.641
met
Hepatocyte growth factor receptor; FOG: Ankyrin repeat.
 
    
0.610
ACPL_5563
Sphingomyelin phosphodiesterase 2.
  
     0.582
ACPL_5008
Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.555
bhp
Serine-rich adhesin for platelets; RTX toxins and related Ca2+-binding proteins.
  
     0.516
ACPL_1555
Hypothetical protein.
  
     0.494
ACPL_3992
Predicted membrane protein.
  
     0.475
aroG
3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; Belongs to the class-II DAHP synthase family.
       0.467
ACPL_1699
Threonine aldolase.
       0.467
ACPL_3978
Putative integral membrane protein.
  
     0.443
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.