STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1728Glycosyltransferases involved in cell wall biogenesis. (359 aa)    
Predicted Functional Partners:
ACPL_1729
Predicted membrane protein.
 
   
 0.957
ACPL_1731
Hypothetical protein.
 
   
 0.888
crtI
Zeta-phytoene desaturase; Phytoene dehydrogenase and related proteins.
 
   
 0.857
ACPL_1730
GCN5-related N-acetyltransferase; Acetyltransferases.
     
 0.827
ACPL_1732
Short-chain dehydrogenase/reductase SDR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.815
ACPL_1710
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Phosphatidylglycerophosphate synthase.
 
     0.580
ACPL_1733
Amino acid transporters.
       0.554
crtI-3
Phytoene/squalene synthetase.
 
  
 0.551
ACPL_4649
Response regulator receiver sensor signal transduction histidine kinase; Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.447
ACPL_6264
Hypothetical protein; Predicted GTPases (dynamin-related).
  
     0.409
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.